EnhancerDB
  1. Home
  2. SNP
  3. rs554356432[chr16:88298508]
Enhancers that have rs554356432[chr16:88298508]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88291992 88310485 enh16901
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Heart
Transcript factors that have rs554356432[chr16:88298508]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88296962 88299423 P63 GTRD no Skin (Keratinocyte) 108221871
chr16 88296991 88299886 P63 GTRD no Skin (Keratinocyte) 108221872
chr16 88298035 88298568 TCF7L2 GTRD no Colon (HCT116) 21735681
chr16 88298450 88298980 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735683
chr16 88298451 88298967 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735684
chr16 88298456 88298832 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735685
chr16 88298484 88299024 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21735686
chr16 88298486 88298862 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21735687
chr16 88298495 88298515 ESR1 JASPAR yes 12271829
chr16 88298498 88298516 ESR1 JASPAR yes 12271830
chr16 88298499 88298516 ESR1 JASPAR yes 12271831
chr16 88298499 88298517 ESR2 JASPAR yes 12271832
chr16 88298500 88298515 ESR2 JASPAR yes 12271833
chr16 88298500 88298520 ESR1 JASPAR yes 12271834
Genes associated with rs554356432[chr16:88298508], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More