EnhancerDB
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  3. rs554360623[chr6:41699252]
Enhancers that have rs554360623[chr6:41699252]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41672005 41699742 enh9103
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs554360623[chr6:41699252]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41699232 41699253 IRF1 JASPAR yes 101670470
chr6 41699233 41699254 ZNF263 JASPAR yes 101670471
Genes associated with rs554360623[chr6:41699252], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More