EnhancerDB
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  3. rs554380629[chr5:150016329]
Enhancers that have rs554380629[chr5:150016329]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 149998886 150027071 enh22720
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs554380629[chr5:150016329]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 150016328 150016341 NFKB1 JASPAR yes 66896447
chr5 150016329 150016334 TFAP2A TRANSFAC yes 66896448
chr5 150016329 150016335 MZF1 JASPAR yes 66896449
chr5 150016329 150016340 NFKB1 JASPAR yes 66896450
chr5 150016329 150016342 NFKB1 JASPAR yes 66896451
Genes associated with rs554380629[chr5:150016329], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More