EnhancerDB
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  3. rs554397233[chr2:24128940]
Enhancers that have rs554397233[chr2:24128940]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 24121345 24130355 enh5351
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Lung (A549) Stomach Muscle (A673) Placenta Breast Blood (Karpas-422) Pancreas Epithelial (MCF-7)
Transcript factors that have rs554397233[chr2:24128940]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 24128933 24128944 FOSL2 JASPAR yes 72396425
chr2 24128935 24128948 SMAD2 JASPAR yes 72396426
chr2 24128938 24128948 TBR1 JASPAR yes 72396427
chr2 24128939 24128949 TBX21 JASPAR yes 72396428
chr2 24128940 24128948 MGA JASPAR yes 72396429
chr2 24128940 24128948 TBX15 JASPAR yes 72396430
chr2 24128940 24128948 TBX1 JASPAR yes 72396431
chr2 24128940 24128948 TBX4 JASPAR yes 72396432
chr2 24128940 24128948 TBX5 JASPAR yes 72396433
chr2 24128940 24128949 ZEB1 JASPAR yes 72396434
chr2 24128940 24128952 PKNOX1 JASPAR yes 72396435
chr2 24128940 24128952 TGIF1 JASPAR yes 72396436
chr2 24128940 24128953 ZBTB18 JASPAR yes 72396437
Genes associated with rs554397233[chr2:24128940], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More