EnhancerDB
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  3. rs554419555[chr17:80239644]
Enhancers that have rs554419555[chr17:80239644]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80234785 80270055 enh4646
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs554419555[chr17:80239644]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80239355 80239711 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21798519
chr17 80239454 80239730 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21798520
chr17 80239476 80239792 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21798521
chr17 80239518 80239902 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21798522
chr17 80239518 80239902 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108311410
chr17 80239554 80239794 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21798523
chr17 80239587 80239678 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21798524
chr17 80239634 80239644 BHLHE40 JASPAR yes 56357080
chr17 80239634 80239644 CLOCK JASPAR yes 56357081
chr17 80239634 80239644 HEY1 JASPAR yes 56357082
chr17 80239634 80239644 MAX JASPAR yes 56357083
chr17 80239634 80239644 MNT JASPAR yes 56357084
chr17 80239636 80239654 TP53 JASPAR yes 56357088
chr17 80239636 80239654 TP63 JASPAR yes 56357089
chr17 80239638 80239653 TP53 JASPAR yes 56357090
chr17 80239640 80239830 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21798525
chr17 80239640 80239830 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108311411
Genes associated with rs554419555[chr17:80239644], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More