EnhancerDB
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  3. rs554422280[chr16:88367453]
Enhancers that have rs554422280[chr16:88367453]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88359920 88374013 enh32028
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs554422280[chr16:88367453]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88366881 88367605 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736101
chr16 88366881 88367605 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108222081
chr16 88366887 88367547 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736103
chr16 88366887 88367547 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108222083
chr16 88366901 88367477 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108222087
chr16 88366913 88367563 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736106
chr16 88366913 88367563 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108222090
chr16 88367035 88367525 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736116
chr16 88367035 88367525 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108222103
chr16 88367340 88367916 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736121
chr16 88367434 88367454 RREB1 JASPAR yes 12279885
chr16 88367439 88367460 ZNF263 JASPAR yes 12279887
chr16 88367440 88367460 RREB1 JASPAR yes 12279888
chr16 88367443 88367453 ZNF740 JASPAR yes 12279891
Genes associated with rs554422280[chr16:88367453], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More