EnhancerDB
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  3. rs554425056[chr1:202013948]
Enhancers that have rs554425056[chr1:202013948]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201996265 202020435 enh12533
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs554425056[chr1:202013948]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202008954 202021472 ZBTB33 GTRD no Lung (A549) 107857529
chr1 202009111 202020493 ZBTB33 GTRD no Lung (A549) 107857530
chr1 202011874 202014365 TCF7L2 GTRD no Colon (HCT116) 21365763
chr1 202011900 202013986 TCF7L2 GTRD no Colon (HCT116) 21365764
chr1 202012454 202014088 TCF7L2 GTRD no Colon (HCT116) 21365767
chr1 202012568 202014020 ZNF143 GTRD no Epithelial (MCF-7) 21365775
chr1 202012581 202013991 TCF7L2 GTRD no Colon (HCT116) 21365777
chr1 202013941 202013952 ELK4 JASPAR yes 34545846
chr1 202013941 202013952 FLI1 JASPAR yes 34545847
chr1 202013941 202013954 ELF3 JASPAR yes 34545848
chr1 202013942 202013952 ETV6 JASPAR yes 34545849
chr1 202013942 202013953 ELF5 JASPAR yes 34545850
chr1 202013942 202013954 EHF JASPAR yes 34545851
chr1 202013942 202013955 ELF1 JASPAR yes 34545852
chr1 202013943 202013950 SPI1 JASPAR yes 34545853
chr1 202013943 202013951 EHF JASPAR yes 34545854
Genes associated with rs554425056[chr1:202013948], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More