EnhancerDB
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  3. rs554469599[chr1:169084655]
Enhancers that have rs554469599[chr1:169084655]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 169076205 169091718 enh12359
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Liver Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs554469599[chr1:169084655]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 169084653 169084667 TLX1 JASPAR yes 32984027
chr1 169084653 169084671 ESR2 JASPAR yes 32984028
chr1 169084654 169084671 ESR1 JASPAR yes 32984029
Genes associated with rs554469599[chr1:169084655], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More