EnhancerDB
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  3. rs554481289[chr17:55690965]
Enhancers that have rs554481289[chr17:55690965]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55673238 55692440 enh4492
Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554481289[chr17:55690965]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55690132 55690988 ZNF274 GTRD no Blood (GM12878) 21773661
chr17 55690132 55690988 ZNF274 GTRD no Blood (GM12878) 108274233
chr17 55690958 55690974 E2F2 JASPAR yes 54975567
chr17 55690963 55690972 NFIX JASPAR yes 54975568
chr17 55690963 55690973 NFIA JASPAR yes 54975569
chr17 55690965 55690971 NFIC JASPAR yes 54975570
Genes associated with rs554481289[chr17:55690965], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More