EnhancerDB
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  3. rs554544588[chr9:116341613]
Enhancers that have rs554544588[chr9:116341613]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 116325685 116352877 enh25925
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs554544588[chr9:116341613]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 116341188 116341636 RUNX3 UCSC Txn Factor no Conserved 108551585
chr9 116341212 116341637 EBF1 UCSC Txn Factor no Conserved 108551586
chr9 116341608 116341614 YY1 JASPAR yes 86426523
Genes associated with rs554544588[chr9:116341613], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More