EnhancerDB
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  3. rs554562419[chr16:11447039]
Enhancers that have rs554562419[chr16:11447039]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11445105 11460875 enh3886
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs554562419[chr16:11447039]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11446605 11447082 TCF7L2 GTRD no Colon (HCT116) 21690682
chr16 11446715 11447220 ZNF274 GTRD no Blood (GM12878) 21690683
chr16 11447031 11447039 FOXO3 JASPAR yes 9508780
chr16 11447032 11447039 FOXD2 JASPAR yes 9508781
chr16 11447032 11447039 FOXI1 JASPAR yes 9508782
chr16 11447032 11447039 FOXL1 JASPAR yes 9508783
chr16 11447032 11447039 FOXO4 JASPAR yes 9508784
chr16 11447032 11447039 FOXO6 JASPAR yes 9508785
chr16 11447032 11447039 FOXP3 JASPAR yes 9508786
chr16 11447032 11447040 FOXD1 JASPAR yes 9508787
chr16 11447032 11447040 FOXG1 JASPAR yes 9508788
chr16 11447032 11447040 FOXO3 JASPAR yes 9508789
Genes associated with rs554562419[chr16:11447039], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More