EnhancerDB
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  3. rs554596879[chr17:76880293]
Enhancers that have rs554596879[chr17:76880293]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76867725 76884335 enh17416
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554596879[chr17:76880293]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76879747 76880323 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108304292
chr17 76879843 76881202 TCF7L2 GTRD no Colon (HCT116) 21795329
chr17 76879843 76881202 TCF7L2 GTRD no Colon (HCT116) 108304296
chr17 76879978 76881170 TCF7L2 GTRD no Colon (HCT116) 21795336
chr17 76879978 76881170 TCF7L2 GTRD no Colon (HCT116) 108304315
chr17 76880017 76881020 TCF7L2 GTRD no Colon (HCT116) 21795337
chr17 76880017 76881020 TCF7L2 GTRD no Colon (HCT116) 108304316
chr17 76880020 76880546 TCF7L2 GTRD no Colon (HCT116) 21795338
chr17 76880020 76880546 TCF7L2 GTRD no Colon (HCT116) 108304317
chr17 76880039 76881107 TCF7L2 GTRD no Colon (HCT116) 21795339
chr17 76880039 76881107 TCF7L2 GTRD no Colon (HCT116) 108304318
chr17 76880054 76880416 ZNF143 GTRD no Epithelial (MCF-7) 21795340
chr17 76880054 76880416 ZNF143 GTRD no Epithelial (MCF-7) 108304319
chr17 76880073 76880591 TCF7L2 GTRD no Colon (HCT116) 21795341
chr17 76880073 76880591 TCF7L2 GTRD no Colon (HCT116) 108304320
chr17 76880276 76880296 RREB1 JASPAR yes 56185807
Genes associated with rs554596879[chr17:76880293], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More