EnhancerDB
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  3. rs554600264[chr12:122221223]
Enhancers that have rs554600264[chr12:122221223]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122219767 122240055 enh2650
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs554600264[chr12:122221223]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122221213 122221227 PLAG1 JASPAR yes 124245806
chr12 122221214 122221228 PLAG1 JASPAR yes 124245807
chr12 122221220 122221237 RXRA JASPAR yes 124245808
chr12 122221221 122221231 ZNF740 JASPAR yes 124245809
chr12 122221221 122221242 ZNF263 JASPAR yes 124245810
chr12 122221222 122221232 SP1 JASPAR yes 124245811
chr12 122221222 122221232 ZNF740 JASPAR yes 124245812
chr12 122221223 122221233 SP1 JASPAR yes 124245813
chr12 122221223 122221233 ZNF740 JASPAR yes 124245814
chr12 122221223 122221244 ZNF263 JASPAR yes 124245815
Genes associated with rs554600264[chr12:122221223], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More