EnhancerDB
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  3. rs554605936[chr3:55665878]
Enhancers that have rs554605936[chr3:55665878]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 55647472 55668015 enh7230
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs554605936[chr3:55665878]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 55665864 55665879 FOXA1 JASPAR yes 2534048
chr3 55665865 55665880 FOXP1 JASPAR yes 2534049
chr3 55665866 55665878 FOXC2 JASPAR yes 2534052
chr3 55665866 55665880 FOXF2 JASPAR yes 2534053
chr3 55665868 55665879 FOXA1 JASPAR yes 2534064
chr3 55665875 55665886 DMRT3 JASPAR yes 2534065
chr3 55665878 55665883 GATA1 TRANSFAC yes 2534066
Genes associated with rs554605936[chr3:55665878], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More