EnhancerDB
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  3. rs554654971[chr1:180579872]
Enhancers that have rs554654971[chr1:180579872]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180576925 180587319 enh784
Bone Marrow (K562) Skin (Keratinocyte) Esophagus Astrocyte Liver Lung Placenta Adrenal Blood (Karpas-422) Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs554654971[chr1:180579872]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180579424 180579960 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21353989
chr1 180579431 180580315 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21353990
chr1 180579535 180580712 ZNF143 GTRD no Epithelial (MCF-7) 107847941
chr1 180579548 180580098 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21353993
chr1 180579589 180580165 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21353994
chr1 180579592 180580082 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21353995
chr1 180579599 180579943 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21353996
chr1 180579613 180579997 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21353997
chr1 180579636 180580076 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21353998
chr1 180579638 180580054 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21353999
chr1 180579648 180580104 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354000
chr1 180579653 180580009 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354001
chr1 180579655 180580015 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354002
chr1 180579658 180580048 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354003
chr1 180579659 180580015 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354004
chr1 180579661 180580031 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354005
chr1 180579664 180580064 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354006
chr1 180579673 180580023 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354007
chr1 180579681 180579937 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354008
chr1 180579687 180580263 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354009
chr1 180579689 180580013 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354010
chr1 180579696 180580006 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354011
chr1 180579698 180579998 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354012
chr1 180579705 180580041 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354013
chr1 180579706 180580016 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354014
chr1 180579711 180580021 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354015
chr1 180579714 180580013 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354016
chr1 180579719 180580004 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354017
chr1 180579724 180579988 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354018
chr1 180579731 180579974 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354019
chr1 180579749 180579979 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354020
chr1 180579753 180579969 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354021
chr1 180579759 180580039 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354022
chr1 180579762 180579963 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354023
chr1 180579762 180579992 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354024
chr1 180579766 180579957 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354025
chr1 180579766 180580270 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354026
chr1 180579769 180579938 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354027
chr1 180579790 180579944 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354028
chr1 180579872 180579880 GATA1 TRANSFAC yes 33531633
Genes associated with rs554654971[chr1:180579872], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More