EnhancerDB
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  3. rs554664624[chr12:48223848]
Enhancers that have rs554664624[chr12:48223848]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 48214553 48225280 enh14688
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (A673) Heart
Transcript factors that have rs554664624[chr12:48223848]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 48223830 48223851 IRF1 JASPAR yes 120720729
chr12 48223840 48223850 NFATC3 JASPAR yes 120720731
chr12 48223841 48223848 NFATC2 JASPAR yes 120720732
Genes associated with rs554664624[chr12:48223848], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More