EnhancerDB
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  3. rs554694772[chr17:53509231]
Enhancers that have rs554694772[chr17:53509231]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs554694772[chr17:53509231]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53509210 53509231 ZNF263 JASPAR yes 54849418
chr17 53509211 53509232 ZNF263 JASPAR yes 54849419
chr17 53509215 53509236 ZNF263 JASPAR yes 54849421
chr17 53509218 53509239 ZNF263 JASPAR yes 54849423
chr17 53509219 53509240 ZNF263 JASPAR yes 54849424
chr17 53509220 53509241 ZNF263 JASPAR yes 54849425
chr17 53509222 53509243 ZNF263 JASPAR yes 54849427
chr17 53509223 53509238 NR2C2 JASPAR yes 54849428
chr17 53509224 53509245 ZNF263 JASPAR yes 54849429
chr17 53509225 53509246 ZNF263 JASPAR yes 54849430
chr17 53509226 53509238 INSM1 JASPAR yes 54849432
chr17 53509231 53509240 SP1 TRANSFAC yes 54849433
chr17 53509231 53509241 SP1 JASPAR yes 54849434
chr17 53509231 53509252 ZNF263 JASPAR yes 54849435
Genes associated with rs554694772[chr17:53509231], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More