EnhancerDB
  1. Home
  2. SNP
  3. rs554771711[chr5:78276224]
Enhancers that have rs554771711[chr5:78276224]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 78266085 78279675 enh55336
Prostate (PC-3) Liver (HepG2) Kidney Brain (SK-N-MC) Large Intestine Brain (SK-N-SH) Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Stomach Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs554771711[chr5:78276224]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 78276214 78276224 BHLHE22 JASPAR yes 63637333
chr5 78276214 78276224 NEUROG2 JASPAR yes 63637334
chr5 78276214 78276224 OLIG1 JASPAR yes 63637335
chr5 78276214 78276224 OLIG2 JASPAR yes 63637336
chr5 78276214 78276224 OLIG3 JASPAR yes 63637337
chr5 78276222 78276228 TCF4 TRANSFAC yes 63637338
Genes associated with rs554771711[chr5:78276224], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More