EnhancerDB
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  3. rs554781725[chr17:80467294]
Enhancers that have rs554781725[chr17:80467294]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80448407 80467804 enh4648
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs554781725[chr17:80467294]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80466566 80469395 ZNF274 GTRD no Bone Marrow (K562) 21800720
chr17 80467289 80467310 IRF1 JASPAR yes 56369609
chr17 80467291 80467312 IRF1 JASPAR yes 56369610
chr17 80467292 80467313 IRF1 JASPAR yes 56369611
chr17 80467293 80467308 FOXP1 JASPAR yes 56369612
chr17 80467293 80467314 IRF1 JASPAR yes 56369613
chr17 80467294 80467309 FOXP1 JASPAR yes 56369614
chr17 80467294 80467315 IRF1 JASPAR yes 56369615
Genes associated with rs554781725[chr17:80467294], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More