EnhancerDB
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  3. rs554807940[chr1:3248878]
Enhancers that have rs554807940[chr1:3248878]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3220368 3259315 enh11429
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554807940[chr1:3248878]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3248873 3248883 ALX3 JASPAR yes 26281103
chr1 3248874 3248882 LHX9 JASPAR yes 26281104
chr1 3248874 3248882 SHOX JASPAR yes 26281105
Genes associated with rs554807940[chr1:3248878], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More