EnhancerDB
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  3. rs554813189[chr1:202060859]
Enhancers that have rs554813189[chr1:202060859]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs554813189[chr1:202060859]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202060316 202061099 ZNF143 GTRD no Epithelial (MCF-7) 21367010
chr1 202060493 202060862 TCF7L2 GTRD no Colon (HCT116) 21367012
chr1 202060799 202061159 ZNF274 GTRD no Bone Marrow (K562) 21367013
chr1 202060813 202061266 ZNF274 GTRD no Cervix (HeLa-S3) 21367014
chr1 202060829 202061177 ZNF274 GTRD no Bone Marrow (K562) 21367015
chr1 202060838 202060859 ZNF263 JASPAR yes 34552497
chr1 202060839 202060860 IRF1 JASPAR yes 34552498
chr1 202060841 202060862 IRF1 JASPAR yes 34552499
chr1 202060841 202060862 ZNF263 JASPAR yes 34552500
chr1 202060842 202060863 ZNF263 JASPAR yes 34552501
chr1 202060845 202060866 IRF1 JASPAR yes 34552502
chr1 202060845 202060866 ZNF263 JASPAR yes 34552503
chr1 202060849 202060870 IRF1 JASPAR yes 34552504
chr1 202060849 202060870 ZNF263 JASPAR yes 34552505
chr1 202060851 202060872 IRF1 JASPAR yes 34552506
chr1 202060852 202060873 ZNF263 JASPAR yes 34552507
chr1 202060853 202060874 IRF1 JASPAR yes 34552508
chr1 202060855 202060876 ZNF263 JASPAR yes 34552509
chr1 202060857 202060878 IRF1 JASPAR yes 34552510
chr1 202060859 202060874 PRDM1 JASPAR yes 34552511
chr1 202060859 202060874 STAT2 JASPAR yes 34552512
chr1 202060859 202060880 ZNF263 JASPAR yes 34552513
Genes associated with rs554813189[chr1:202060859], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More