EnhancerDB
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  3. rs554838133[chr1:28775387]
Enhancers that have rs554838133[chr1:28775387]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28772305 28780210 enh26592
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Peripheral Blood (MM.1S) Lung (PC-9) Thymus Stomach
Transcript factors that have rs554838133[chr1:28775387]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28775371 28775391 RREB1 JASPAR yes 27772195
chr1 28775372 28775392 RREB1 JASPAR yes 27772196
chr1 28775373 28775388 NR2C2 JASPAR yes 27772197
chr1 28775373 28775393 RREB1 JASPAR yes 27772198
chr1 28775374 28775395 ZNF263 JASPAR yes 27772201
chr1 28775380 28775390 SP1 JASPAR yes 27772206
chr1 28775383 28775388 SP1 TRANSFAC yes 27772207
chr1 28775384 28775394 ZNF740 JASPAR yes 27772208
Genes associated with rs554838133[chr1:28775387], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More