EnhancerDB
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  3. rs554845978[chr16:15997270]
Enhancers that have rs554845978[chr16:15997270]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 15989540 15998735 enh31713
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs554845978[chr16:15997270]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 15995521 15999182 ZBTB33 GTRD no Lung (A549) 108185052
chr16 15996049 15999104 TCF7L2 GTRD no Colon (HCT116) 21693966
chr16 15996049 15999104 TCF7L2 GTRD no Colon (HCT116) 21693967
chr16 15996049 15999104 TCF7L2 GTRD no Colon (HCT116) 108185053
chr16 15996112 15997997 ZNF274 GTRD no Cervix (HeLa-S3) 21693968
chr16 15996112 15997997 ZNF274 GTRD no Cervix (HeLa-S3) 108185054
chr16 15996124 15999027 ZNF274 GTRD no Liver (HepG2) 21693969
chr16 15996124 15999027 ZNF274 GTRD no Liver (HepG2) 108185055
chr16 15996137 15999087 ZBTB33 GTRD no Lung (A549) 108185056
chr16 15996139 15999181 ZBTB33 GTRD no Lung (A549) 108185058
chr16 15996149 15997717 ZNF274 GTRD no Liver (HepG2) 21693970
chr16 15996149 15997717 ZNF274 GTRD no Liver (HepG2) 108185060
chr16 15996149 15997733 ZBTB33 GTRD no Lung (A549) 108185061
chr16 15996149 15997936 ZBTB33 GTRD no Lung (A549) 108185062
chr16 15996160 15997294 ZBTB33 GTRD no Lung (A549) 108185063
chr16 15996160 15998011 ZBTB33 GTRD no Lung (A549) 108185064
chr16 15996180 15997610 ZNF274 GTRD no Liver (HepG2) 21693973
chr16 15996180 15997610 ZNF274 GTRD no Liver (HepG2) 108185067
chr16 15996215 15997624 ZNF274 GTRD no Liver (HepG2) 21693977
chr16 15996215 15997624 ZNF274 GTRD no Liver (HepG2) 108185074
chr16 15996241 15998056 ZNF274 GTRD no Liver (HepG2) 21693982
chr16 15996241 15998056 ZNF274 GTRD no Liver (HepG2) 108185080
chr16 15996254 15997931 TCF7L2 GTRD no Colon (HCT116) 21693984
chr16 15996254 15997931 TCF7L2 GTRD no Colon (HCT116) 108185083
chr16 15996258 15999108 ZBTB33 GTRD no Lung (A549) 108185084
chr16 15996277 15997436 ZNF274 GTRD no Liver (HepG2) 21693988
chr16 15996277 15997436 ZNF274 GTRD no Liver (HepG2) 108185090
chr16 15996301 15997295 ZNF274 GTRD no Liver (HepG2) 21693993
chr16 15996301 15997295 ZNF274 GTRD no Liver (HepG2) 108185096
chr16 15996316 15997367 ZNF143 GTRD no Epithelial (MCF-7) 21693998
chr16 15996316 15997367 ZNF143 GTRD no Epithelial (MCF-7) 108185101
chr16 15996319 15998017 ZBTB33 GTRD no Lung (A549) 108185103
chr16 15996325 15997608 ZBTB33 GTRD no Lung (A549) 108185106
chr16 15996334 15997293 ZNF143 GTRD no Epithelial (MCF-7) 21694002
chr16 15996334 15997293 ZNF143 GTRD no Epithelial (MCF-7) 108185108
chr16 15996339 15997282 ZNF143 GTRD no Epithelial (MCF-7) 21694004
chr16 15996339 15997282 ZNF143 GTRD no Epithelial (MCF-7) 108185109
chr16 15996341 15997460 ZBTB33 GTRD no Lung (A549) 108185111
chr16 15996349 15997301 ZBTB33 GTRD no Brain (SK-N-SH) 108185115
chr16 15996351 15997982 ZNF274 GTRD no Liver (HepG2) 21694007
chr16 15996351 15997982 ZNF274 GTRD no Liver (HepG2) 108185117
chr16 15996354 15997794 ZNF274 GTRD no Cervix (HeLa-S3) 21694008
chr16 15996354 15997794 ZNF274 GTRD no Cervix (HeLa-S3) 108185118
chr16 15996356 15997794 ZNF274 GTRD no Bone Marrow (K562) 21694009
chr16 15996356 15997794 ZNF274 GTRD no Bone Marrow (K562) 108185119
chr16 15996395 15997273 TCF7L2 GTRD no Colon (HCT116) 21694016
chr16 15996395 15997273 TCF7L2 GTRD no Colon (HCT116) 108185130
chr16 15996416 15997288 ZBTB33 GTRD no Brain (SK-N-SH) 108185140
chr16 15996432 15997955 ZNF274 GTRD no Bone Marrow (K562) 21694027
chr16 15996432 15997955 ZNF274 GTRD no Bone Marrow (K562) 108185146
chr16 15996450 15997294 ZNF143 GTRD no Epithelial (MCF-7) 21694042
chr16 15996450 15997294 ZNF143 GTRD no Epithelial (MCF-7) 108185162
chr16 15996472 15997280 TCF7L2 GTRD no Colon (HCT116) 21694049
chr16 15996472 15997280 TCF7L2 GTRD no Colon (HCT116) 108185171
chr16 15996474 15997323 ZNF274 GTRD no Cervix (HeLa-S3) 21694051
chr16 15996474 15997323 ZNF274 GTRD no Cervix (HeLa-S3) 108185174
chr16 15996559 15997299 ZBTB33 GTRD no Brain (SK-N-SH) 108185202
Genes associated with rs554845978[chr16:15997270], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More