EnhancerDB
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  3. rs554894254[chr17:62674181]
Enhancers that have rs554894254[chr17:62674181]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62671385 62687563 enh17299
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs554894254[chr17:62674181]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62672894 62676752 ZNF143 GTRD no Epithelial (MCF-7) 21778864
chr17 62672894 62676752 ZNF143 GTRD no Epithelial (MCF-7) 108282545
chr17 62673051 62676826 ZNF143 GTRD no Epithelial (MCF-7) 21778870
chr17 62673051 62676826 ZNF143 GTRD no Epithelial (MCF-7) 108282546
chr17 62673662 62676737 ZNF143 GTRD no Epithelial (MCF-7) 21778871
chr17 62673662 62676737 ZNF143 GTRD no Epithelial (MCF-7) 108282547
chr17 62673696 62676825 ZNF143 GTRD no Epithelial (MCF-7) 21778872
chr17 62673696 62676825 ZNF143 GTRD no Epithelial (MCF-7) 108282548
chr17 62673726 62676791 ZNF143 GTRD no Epithelial (MCF-7) 21778873
chr17 62673726 62676791 ZNF143 GTRD no Epithelial (MCF-7) 108282549
chr17 62673769 62675741 TCF7L2 GTRD no Colon (HCT116) 21778874
chr17 62673802 62676019 TCF7L2 GTRD no Colon (HCT116) 21778875
chr17 62673802 62676019 TCF7L2 GTRD no Colon (HCT116) 108282550
chr17 62673810 62674839 TCF7L2 GTRD no Colon (HCT116) 21778876
chr17 62673933 62676781 TCF7L2 GTRD no Colon (HCT116) 21778877
chr17 62673933 62676781 TCF7L2 GTRD no Colon (HCT116) 108282551
chr17 62674170 62674181 FOXB1 JASPAR yes 55310084
chr17 62674171 62674182 FOXB1 JASPAR yes 55310086
chr17 62674172 62674183 FOXB1 JASPAR yes 55310087
chr17 62674173 62674181 FOXL1 JASPAR yes 55310088
chr17 62674173 62674184 FOXB1 JASPAR yes 55310089
chr17 62674174 62674185 FOXB1 JASPAR yes 55310090
chr17 62674175 62674183 FOXL1 JASPAR yes 55310091
chr17 62674175 62674186 FOXB1 JASPAR yes 55310092
chr17 62674176 62674187 FOXB1 JASPAR yes 55310093
chr17 62674177 62674185 FOXL1 JASPAR yes 55310094
chr17 62674177 62674188 FOXB1 JASPAR yes 55310095
chr17 62674178 62674189 FOXB1 JASPAR yes 55310096
chr17 62674179 62674187 FOXL1 JASPAR yes 55310097
chr17 62674179 62674190 FOXB1 JASPAR yes 55310098
chr17 62674180 62674191 FOXB1 JASPAR yes 55310099
chr17 62674180 62674195 MEF2A JASPAR yes 55310100
chr17 62674181 62674189 FOXL1 JASPAR yes 55310101
chr17 62674181 62674193 MEF2A JASPAR yes 55310102
chr17 62674181 62674193 MEF2B JASPAR yes 55310103
chr17 62674181 62674193 MEF2D JASPAR yes 55310104
Genes associated with rs554894254[chr17:62674181], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More