EnhancerDB
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  3. rs554900422[chr1:12219622]
Enhancers that have rs554900422[chr1:12219622]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12196945 12220680 enh11507
Prostate (PC-3) Large Intestine Ovary Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Uterus Thymus Heart
Transcript factors that have rs554900422[chr1:12219622]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12217208 12219934 ZNF274 GTRD no Bone Marrow (K562) 107802098
chr1 12219607 12219627 TP63 JASPAR yes 26805100
chr1 12219608 12219626 TP73 JASPAR yes 26805101
chr1 12219615 12219627 HES5 JASPAR yes 26805102
chr1 12219615 12219627 HES7 JASPAR yes 26805103
chr1 12219615 12219627 PKNOX1 JASPAR yes 26805104
chr1 12219615 12219627 PKNOX2 JASPAR yes 26805105
chr1 12219615 12219627 TGIF1 JASPAR yes 26805106
chr1 12219615 12219627 TGIF2 JASPAR yes 26805107
chr1 12219615 12219631 T JASPAR yes 26805108
Genes associated with rs554900422[chr1:12219622], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More