EnhancerDB
  1. Home
  2. SNP
  3. rs554910122[chr1:40451992]
Enhancers that have rs554910122[chr1:40451992]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40433665 40464395 enh265
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (GM12878) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs554910122[chr1:40451992]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40451977 40451993 POU4F2 JASPAR yes 28305187
chr1 40451977 40451993 POU4F3 JASPAR yes 28305188
chr1 40451978 40451993 FOXA1 JASPAR yes 28305190
chr1 40451979 40451993 POU4F1 JASPAR yes 28305192
chr1 40451979 40451994 FOXP1 JASPAR yes 28305193
chr1 40451979 40451994 HNF1A JASPAR yes 28305194
chr1 40451980 40451992 FOXC2 JASPAR yes 28305195
chr1 40451980 40451994 ONECUT2 JASPAR yes 28305196
chr1 40451980 40451994 ONECUT3 JASPAR yes 28305197
chr1 40451981 40451992 FOXB1 JASPAR yes 28305198
chr1 40451981 40451992 FOXC1 JASPAR yes 28305199
chr1 40451981 40451992 PROP1 JASPAR yes 28305200
chr1 40451981 40451997 POU4F2 JASPAR yes 28305201
chr1 40451981 40451997 POU4F3 JASPAR yes 28305202
chr1 40451982 40451997 FOXA1 JASPAR yes 28305204
chr1 40451983 40451995 FOXI1 JASPAR yes 28305205
chr1 40451983 40451997 POU4F1 JASPAR yes 28305206
chr1 40451983 40451998 FOXP1 JASPAR yes 28305207
chr1 40451983 40451998 HNF1A JASPAR yes 28305208
chr1 40451984 40451996 FOXC2 JASPAR yes 28305209
chr1 40451984 40451998 ONECUT2 JASPAR yes 28305210
chr1 40451984 40451998 ONECUT3 JASPAR yes 28305211
chr1 40451985 40451996 FOXB1 JASPAR yes 28305212
chr1 40451985 40451996 FOXC1 JASPAR yes 28305213
chr1 40451985 40451996 PROP1 JASPAR yes 28305214
chr1 40451986 40452001 FOXA1 JASPAR yes 28305216
chr1 40451987 40451999 FOXI1 JASPAR yes 28305217
chr1 40451987 40452002 FOXP1 JASPAR yes 28305218
chr1 40451988 40452000 FOXC2 JASPAR yes 28305219
chr1 40451988 40452002 ONECUT2 JASPAR yes 28305220
chr1 40451988 40452002 ONECUT3 JASPAR yes 28305221
chr1 40451989 40452000 FOXB1 JASPAR yes 28305222
chr1 40451989 40452000 FOXC1 JASPAR yes 28305223
chr1 40451990 40451994 YY1 TRANSFAC yes 28305224
Genes associated with rs554910122[chr1:40451992], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More