EnhancerDB
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  3. rs554938779[chr2:232048727]
Enhancers that have rs554938779[chr2:232048727]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232042563 232058252 enh19315
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Large Intestine Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs554938779[chr2:232048727]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232048721 232048731 GCM2 JASPAR yes 81703861
chr2 232048721 232048732 GCM1 JASPAR yes 81703862
chr2 232048723 232048732 THAP1 JASPAR yes 81703863
chr2 232048723 232048738 NR2C2 JASPAR yes 81703864
chr2 232048726 232048730 LFA1 TRANSFAC yes 81703865
chr2 232048726 232048738 INSM1 JASPAR yes 81703866
Genes associated with rs554938779[chr2:232048727], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More