EnhancerDB
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  3. rs554945206[chr6:13360177]
Enhancers that have rs554945206[chr6:13360177]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13358871 13387475 enh8960
Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Blood (T-cell) Heart
Transcript factors that have rs554945206[chr6:13360177]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13360174 13360189 FOXP1 JASPAR yes 100020509
chr6 13360175 13360190 FOXP1 JASPAR yes 100020510
chr6 13360176 13360191 FOXP1 JASPAR yes 100020511
chr6 13360177 13360192 FOXP1 JASPAR yes 100020512
chr6 13360177 13360198 IRF1 JASPAR yes 100020513
Genes associated with rs554945206[chr6:13360177], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More