EnhancerDB
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  3. rs554947729[chr1:55334000]
Enhancers that have rs554947729[chr1:55334000]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55319988 55335735 enh370
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Liver Astrocyte Bone (Osteoblast) Lung (A549) Stomach Placenta Colon (HCT116) Adrenal Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs554947729[chr1:55334000]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55333989 55334008 PAX5 JASPAR yes 29002723
chr1 55333998 55334008 SP1 JASPAR yes 29002724
Genes associated with rs554947729[chr1:55334000], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More