EnhancerDB
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  3. rs554966420[chr1:154803729]
Enhancers that have rs554966420[chr1:154803729]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154772139 154826495 enh644
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs554966420[chr1:154803729]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154803717 154803730 POU2F2 JASPAR yes 32315938
chr1 154803728 154803742 FOXF2 JASPAR yes 32315939
chr1 154803728 154803743 FOXP1 JASPAR yes 32315940
Genes associated with rs554966420[chr1:154803729], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More