EnhancerDB
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  3. rs554975441[chr17:53521744]
Enhancers that have rs554975441[chr17:53521744]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs554975441[chr17:53521744]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53521731 53521745 ZIC1 JASPAR yes 54851507
chr17 53521739 53521744 SP1 TRANSFAC yes 54851508
chr17 53521740 53521750 ZNF740 JASPAR yes 54851509
Genes associated with rs554975441[chr17:53521744], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More