EnhancerDB
  1. Home
  2. SNP
  3. rs554995727[chr1:3230276]
Enhancers that have rs554995727[chr1:3230276]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3220368 3259315 enh11429
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554995727[chr1:3230276]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3230265 3230280 TFAP2C JASPAR yes 26278441
chr1 3230267 3230279 INSM1 JASPAR yes 26278442
chr1 3230267 3230284 RARA JASPAR yes 26278443
Genes associated with rs554995727[chr1:3230276], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More