EnhancerDB
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  3. rs554998742[chr4:4474845]
Enhancers that have rs554998742[chr4:4474845]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 4472125 4496609 enh7856
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Astrocyte Bone (Osteoblast) Lung (A549) Blood (GM12878) Muscle (A673) Placenta Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs554998742[chr4:4474845]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 4474835 4474845 GSX1 JASPAR yes 87946241
chr4 4474835 4474845 GSX2 JASPAR yes 87946242
chr4 4474840 4474852 GRHL1 JASPAR yes 87946246
chr4 4474841 4474851 TFCP2 JASPAR yes 87946248
Genes associated with rs554998742[chr4:4474845], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More