EnhancerDB
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  3. rs554999940[chr6:110850005]
Enhancers that have rs554999940[chr6:110850005]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 110836885 110871534 enh23506
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs554999940[chr6:110850005]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 110849993 110850008 STAT2 JASPAR yes 104294277
chr6 110849995 110850016 ZNF263 JASPAR yes 104294278
chr6 110849996 110850011 FOXP1 JASPAR yes 104294279
chr6 110850001 110850012 E2F6 JASPAR yes 104294280
Genes associated with rs554999940[chr6:110850005], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More