EnhancerDB
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  3. rs555020156[chr17:79702660]
Enhancers that have rs555020156[chr17:79702660]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79687096 79705379 enh17447
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs555020156[chr17:79702660]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79697872 79702757 TCF7L2 GTRD no Colon (HCT116) 21798308
chr17 79697872 79702757 TCF7L2 GTRD no Colon (HCT116) 108310128
chr17 79698203 79702705 TCF7L2 GTRD no Colon (HCT116) 21798310
chr17 79698203 79702705 TCF7L2 GTRD no Colon (HCT116) 108310134
chr17 79701595 79702799 ZNF143 GTRD no Epithelial (MCF-7) 21798352
chr17 79701635 79702695 TCF7L2 GTRD no Colon (HCT116) 21798353
chr17 79701635 79704037 TCF7L2 GTRD no Colon (HCT116) 21798354
chr17 79701665 79702739 ZNF143 GTRD no Epithelial (MCF-7) 21798355
chr17 79701685 79702882 ZNF143 GTRD no Epithelial (MCF-7) 21798358
chr17 79701698 79702710 ZNF143 GTRD no Epithelial (MCF-7) 21798360
chr17 79701919 79703589 TCF7L2 GTRD no Colon (HCT116) 21798367
chr17 79702123 79702784 TCF7L2 GTRD no Colon (HCT116) 21798376
chr17 79702643 79703193 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21798377
chr17 79702648 79702662 JUN JASPAR yes 56340981
chr17 79702649 79703033 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21798378
Genes associated with rs555020156[chr17:79702660], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More