EnhancerDB
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  3. rs555020530[chr2:28584267]
Enhancers that have rs555020530[chr2:28584267]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28576025 28608635 enh18385
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs555020530[chr2:28584267]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28584259 28584274 TFAP2A JASPAR yes 72641967
chr2 28584259 28584274 TFAP2C JASPAR yes 72641968
chr2 28584265 28584270 SP1 TRANSFAC yes 72641969
Genes associated with rs555020530[chr2:28584267], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More