EnhancerDB
  1. Home
  2. SNP
  3. rs555176682[chr2:238841725]
Enhancers that have rs555176682[chr2:238841725]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238823877 238854377 enh19404
Bone Marrow (K562) Brain (SK-N-SH) Epithelial (MCF-7) Prostate (RWPE1) Lung (PC-9) Esophagus Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Blood (T-cell) Heart
Transcript factors that have rs555176682[chr2:238841725]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238841714 238841728 PLAG1 JASPAR yes 82149524
chr2 238841721 238841726 SP1 TRANSFAC yes 82149525
chr2 238841722 238841727 SP1 TRANSFAC yes 82149526
chr2 238841722 238841731 THAP1 JASPAR yes 82149527
chr2 238841725 238841729 LFA1 TRANSFAC yes 82149528
Genes associated with rs555176682[chr2:238841725], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More