EnhancerDB
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  3. rs555204294[chr2:200842131]
Enhancers that have rs555204294[chr2:200842131]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 200836591 200856795 enh48394
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Stomach Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs555204294[chr2:200842131]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 200842123 200842133 HOXA13 JASPAR yes 80073243
chr2 200842123 200842133 HOXB13 JASPAR yes 80073244
chr2 200842123 200842133 HOXD13 JASPAR yes 80073245
chr2 200842123 200842134 HOXA10 JASPAR yes 80073246
chr2 200842124 200842133 CDX1 JASPAR yes 80073247
chr2 200842124 200842135 CDX2 JASPAR yes 80073248
Genes associated with rs555204294[chr2:200842131], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More