EnhancerDB
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  3. rs555256953[chr17:76931646]
Enhancers that have rs555256953[chr17:76931646]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76924065 76939144 enh17419
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs555256953[chr17:76931646]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76931414 76931858 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21795409
chr17 76931463 76933661 TCF7L2 GTRD no Colon (HCT116) 21795410
chr17 76931511 76932095 TCF7L2 GTRD no Colon (HCT116) 21795411
chr17 76931640 76931650 SP1 JASPAR yes 56190370
chr17 76931641 76931649 SP1 TRANSFAC yes 56190371
chr17 76931641 76931650 SP1 TRANSFAC yes 56190372
chr17 76931642 76931647 SP1 TRANSFAC yes 56190373
chr17 76931643 76931648 SP1 TRANSFAC yes 56190374
chr17 76931643 76931649 SP1 TRANSFAC yes 56190375
Genes associated with rs555256953[chr17:76931646], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More