EnhancerDB
  1. Home
  2. SNP
  3. rs555372275[chr1:16439449]
Enhancers that have rs555372275[chr1:16439449]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16434153 16452566 enh26556
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs555372275[chr1:16439449]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16439437 16439451 EBF1 JASPAR yes 27025882
chr1 16439437 16439451 NR2F1 JASPAR yes 27025883
chr1 16439442 16439453 ESRRA JASPAR yes 27025884
chr1 16439442 16439455 NR2F1 JASPAR yes 27025885
chr1 16439445 16439460 ESR2 JASPAR yes 27025886
chr1 16439446 16439450 ESR1 TRANSFAC yes 27025887
Genes associated with rs555372275[chr1:16439449], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More