EnhancerDB
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  3. rs555376166[chr17:78845569]
Enhancers that have rs555376166[chr17:78845569]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78831119 78853255 enh4640
Skin (Keratinocyte) Brain (SK-N-SH) Blood (T-cell) Bone (Osteoblast) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs555376166[chr17:78845569]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78845561 78845572 PROP1 JASPAR yes 56288103
chr17 78845563 78845573 HOXA13 JASPAR yes 56288105
chr17 78845563 78845573 HOXB13 JASPAR yes 56288106
chr17 78845563 78845573 HOXC10 JASPAR yes 56288107
chr17 78845563 78845573 HOXD13 JASPAR yes 56288108
chr17 78845563 78845574 HOXA10 JASPAR yes 56288109
chr17 78845564 78845573 CDX1 JASPAR yes 56288110
chr17 78845564 78845575 CDX2 JASPAR yes 56288111
chr17 78845567 78845588 IRF1 JASPAR yes 56288112
Genes associated with rs555376166[chr17:78845569], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More