EnhancerDB
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  3. rs555394309[chr12:96626360]
Enhancers that have rs555394309[chr12:96626360]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96582645 96638775 enh14921
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs555394309[chr12:96626360]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96626349 96626364 FOXP1 JASPAR yes 123050892
chr12 96626351 96626363 FOXC2 JASPAR yes 123050893
chr12 96626353 96626367 ONECUT2 JASPAR yes 123050894
chr12 96626353 96626367 ONECUT3 JASPAR yes 123050895
chr12 96626353 96626368 FOXP1 JASPAR yes 123050896
chr12 96626354 96626369 FOXA1 JASPAR yes 123050897
chr12 96626355 96626366 FOXB1 JASPAR yes 123050898
chr12 96626355 96626366 FOXC1 JASPAR yes 123050899
chr12 96626355 96626367 FOXC2 JASPAR yes 123050900
chr12 96626356 96626368 FOXI1 JASPAR yes 123050901
chr12 96626359 96626374 MEF2C JASPAR yes 123050902
chr12 96626360 96626375 MEF2A JASPAR yes 123050903
Genes associated with rs555394309[chr12:96626360], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More