EnhancerDB
  1. Home
  2. SNP
  3. rs555404303[chr12:50606895]
Enhancers that have rs555404303[chr12:50606895]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50600876 50615015 enh2345
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Lung (A549) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Stomach Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs555404303[chr12:50606895]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50606888 50606896 MGA JASPAR yes 120818976
chr12 50606888 50606896 TBX15 JASPAR yes 120818977
chr12 50606888 50606896 TBX1 JASPAR yes 120818978
chr12 50606888 50606896 TBX4 JASPAR yes 120818979
chr12 50606888 50606896 TBX5 JASPAR yes 120818980
chr12 50606888 50606901 SMAD2 JASPAR yes 120818981
chr12 50606892 50606903 FOSL2 JASPAR yes 120818982
Genes associated with rs555404303[chr12:50606895], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More