EnhancerDB
  1. Home
  2. SNP
  3. rs555469386[chr6:39183780]
Enhancers that have rs555469386[chr6:39183780]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 39165525 39196155 enh23215
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Liver Blood (GM12878) Stomach Placenta Colon (HCT116) Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs555469386[chr6:39183780]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 39183766 39183780 GLIS3 JASPAR yes 101516830
chr6 39183774 39183781 SP1 TRANSFAC yes 101516832
chr6 39183774 39183783 SP1 TRANSFAC yes 101516833
chr6 39183779 39183789 SP1 JASPAR yes 101516834
Genes associated with rs555469386[chr6:39183780], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More