EnhancerDB
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  3. rs555492056[chr16:27338087]
Enhancers that have rs555492056[chr16:27338087]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 27322265 27344955 enh16614
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs555492056[chr16:27338087]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 27338051 27338721 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108190519
chr16 27338068 27338088 RREB1 JASPAR yes 10187095
chr16 27338080 27338090 ZNF740 JASPAR yes 10187096
chr16 27338081 27338101 RREB1 JASPAR yes 10187097
chr16 27338086 27338091 SP1 TRANSFAC yes 10187098
Genes associated with rs555492056[chr16:27338087], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More