EnhancerDB
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  3. rs555555662[chr19:4975972]
Enhancers that have rs555555662[chr19:4975972]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4966316 4995955 enh4974
Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs555555662[chr19:4975972]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4975153 4977554 TEF1 GTRD no Bone (Osteoblast) 21842893
chr19 4975153 4977554 TEF1 GTRD no Bone (Osteoblast) 108374027
chr19 4975924 4977363 AR GTRD no Prostate (PC-3) 21842894
chr19 4975924 4977363 AR GTRD no Prostate (PC-3) 108374028
chr19 4975972 4975976 LFA1 TRANSFAC yes 112201184
Genes associated with rs555555662[chr19:4975972], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More