EnhancerDB
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  3. rs555600159[chr1:154981398]
Enhancers that have rs555600159[chr1:154981398]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154972605 154982275 enh12281
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Blood (T-cell) Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Thymus Heart
Transcript factors that have rs555600159[chr1:154981398]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154981377 154981398 ZNF263 JASPAR yes 32327434
chr1 154981388 154981398 SP1 JASPAR yes 32327435
chr1 154981390 154981400 ZNF740 JASPAR yes 32327436
chr1 154981394 154981403 ZEB1 JASPAR yes 32327437
chr1 154981395 154981405 FIGLA JASPAR yes 32327438
chr1 154981395 154981405 TCF4 JASPAR yes 32327439
chr1 154981396 154981405 SNAI2 JASPAR yes 32327440
chr1 154981396 154981416 TP63 JASPAR yes 32327441
chr1 154981397 154981402 USF2 TRANSFAC yes 32327442
chr1 154981397 154981415 TP73 JASPAR yes 32327443
chr1 154981398 154981413 TP53 JASPAR yes 32327444
Genes associated with rs555600159[chr1:154981398], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More