EnhancerDB
  1. Home
  2. SNP
  3. rs555689553[chr1:23160955]
Enhancers that have rs555689553[chr1:23160955]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23150145 23164575 enh122
Skin (Keratinocyte) Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Brain (SK-N-SH) Lung (A549) Placenta Colon (HCT116) Breast Thyroid Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Heart
Transcript factors that have rs555689553[chr1:23160955]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23160946 23160963 RARA JASPAR yes 27396724
chr1 23160955 23160960 TFAP2A TRANSFAC yes 27396725
chr1 23160955 23160961 MZF1 JASPAR yes 27396726
Genes associated with rs555689553[chr1:23160955], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More