EnhancerDB
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  3. rs555804407[chr17:79377301]
Enhancers that have rs555804407[chr17:79377301]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79375645 79405275 enh17444
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs555804407[chr17:79377301]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79377283 79377304 IRF1 JASPAR yes 56323618
chr17 79377284 79377305 IRF1 JASPAR yes 56323620
chr17 79377285 79377306 IRF1 JASPAR yes 56323621
chr17 79377289 79377304 PRDM1 JASPAR yes 56323622
chr17 79377289 79377310 IRF1 JASPAR yes 56323623
chr17 79377290 79377305 FOXP1 JASPAR yes 56323624
chr17 79377291 79377306 IRF9 JASPAR yes 56323625
chr17 79377292 79377306 IRF7 JASPAR yes 56323626
chr17 79377293 79377307 STAT1 JASPAR yes 56323627
chr17 79377293 79377308 PRDM1 JASPAR yes 56323628
chr17 79377293 79377308 STAT2 JASPAR yes 56323629
Genes associated with rs555804407[chr17:79377301], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More