EnhancerDB
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  3. rs555821429[chr19:4568399]
Enhancers that have rs555821429[chr19:4568399]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4562990 4590495 enh17872
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Lung Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Spleen Uterus Stomach
Transcript factors that have rs555821429[chr19:4568399]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4566417 4569437 TCF7L2 GTRD no Colon (HCT116) 21841499
chr19 4566417 4569437 TCF7L2 GTRD no Colon (HCT116) 108372159
chr19 4566417 4569437 TCF7L2 GTRD no Colon (HCT116) 108372160
chr19 4566417 4569437 TCF7L2 GTRD no Colon (HCT116) 108372161
chr19 4566616 4568457 ZNF143 GTRD no Epithelial (MCF-7) 108372164
chr19 4566616 4568457 ZNF143 GTRD no Epithelial (MCF-7) 108372165
chr19 4566786 4568448 ZNF274 GTRD no Bone Marrow (K562) 108372166
chr19 4566786 4568448 ZNF274 GTRD no Bone Marrow (K562) 108372167
chr19 4567175 4568438 ZNF274 GTRD no Cervix (HeLa-S3) 21841504
chr19 4567175 4568438 ZNF274 GTRD no Cervix (HeLa-S3) 108372177
chr19 4567175 4568438 ZNF274 GTRD no Cervix (HeLa-S3) 108372178
chr19 4567300 4568500 ZNF274 GTRD no Bone Marrow (K562) 108372206
chr19 4567300 4568500 ZNF274 GTRD no Bone Marrow (K562) 108372207
chr19 4568386 4568400 PLAG1 JASPAR yes 112174301
chr19 4568392 4568410 RARA JASPAR yes 112174302
chr19 4568393 4568401 TBX15 JASPAR yes 112174303
chr19 4568393 4568404 E2F6 JASPAR yes 112174304
chr19 4568394 4568399 SP1 TRANSFAC yes 112174305
chr19 4568399 4569157 ZNF274 GTRD no Bone Marrow (K562) 108372333
Genes associated with rs555821429[chr19:4568399], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More